BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C06SP1|AL428188
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1886 0.0
3x_Contig1560 483 e-136
>3x_Contig1783
Length = 22123
Score = 1886 bits (942), Expect = 0.0
Identities = 969/988 (98%)
Strand = Plus / Plus
Query: 1 acatacaatcaaagcttagttccttttgcgaagagatcagagctttggcactcaaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 acatacaatcaaagcttagttccttttgcgaagagatcagagctttggcactcaaagaag 1301
Query: 61 gttataacttagaaggtgataaatcaccttcaagtaaaccttattttatgtcatggccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 gttataacttagaaggtgataaatcaccttcaagtaaaccttattttatgtcatggccaa 1361
Query: 121 aggraatcgatgtaaatcatcccaatttcgccttcttcacaaaactacagtttcaatatg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 aggaaatcgatgtaaatcatcccaatttcgccttcttcacaaaactacagtttcaatatg 1421
Query: 181 ataagagtttagaaacaattcttaacagttgtkacttacaagaattgcagctggacccta 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1422 ataagagtttagaaacaattcttaacagttgttacttacaagaattgcagctggacccta 1481
Query: 241 ctcgcattattgaaactctgcaacagcatttcaacaattcaattctccgatatgcagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 ctcgcattattgaaactctgcaacagcatttcaacaattcaattctccgatatgcagata 1541
Query: 301 tagaaaacatttctgacgtcaaagatgagtctcccatgtcattcgacacagagcacgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 tagaaaacatttctgacgtcaaagatgagtctcccatgtcattcgacacagagcacgagt 1601
Query: 361 gtgctgatacctcagaagatatttctgataaatcagaaatctcttcaacaaattcagata 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 gtactgatacctcagaagatatttctgataaatcagaaatctcttcaacaaattcagata 1661
Query: 421 atccaattcaaaattgctacccaacatataagagrkccttcatcaagcatgaatccagag 480
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1662 atccaattcaaaattgctacccaacatataaaagatccttcatcaagcatgaatccagag 1721
Query: 481 gratactggaaaagrtcttcaaagttaaacratgtcctaatacctctgagcgattatrca 540
| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 1722 gaatactggaaaagatcttcaaagttaaacaatgtcctaatacctctgagcgattataca 1781
Query: 541 tcgctcagaaacttgatttgacaccatctcaagttaggatatggtttactaacaagagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1782 tcgctcagaaacttgatttgacaccatctcaagttaggatatggtttactaacaagagaa 1841
Query: 601 tgagagckaaarrrcatactactggtaaaggaactaaacgtaaatcaaagaaatacccga 660
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 tgagagctaaaaaacatactactggtaaaggaactaaacgtaaatcaaagaaatacccga 1901
Query: 661 gctaaaatagctcgggtctatttgataattagacaatatacagtgctaatttctacctat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 gctaaaatagctcgggtctatttgataattagacaatatacagtgctaatttctacctat 1961
Query: 721 acaactttcttatacttcatcactatcaccatatctgtractatattgtctaatttcacc 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1962 acaactttcttatacttcatcactatcaccatatctgtaactatattgtctaatttcacc 2021
Query: 781 caacctcttaagcttttcctggaacgcaatgttggcgtttatcacggaatcggtctgctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2022 caacctcttaagcttttcctggaacgcaatgttggcgtttatcacggaatcggtctgctt 2081
Query: 841 tgccgaggataagcatcgcaagaagtcttctgctatggtctgcatctcctgtgggcagcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2082 tgccgaggataagcatcgcaagaagtcttctgctatggtctgcatctcctgtgggcagcg 2141
Query: 901 gasaggtagtgagacaaactcgggcagaatattgactatggtattgatatcaccatcgat 960
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 gagcagtagtgagacaaactcgggcagaatattgactatggtattgatatcaccatcgat 2201
Query: 961 gaaggcattggaaagatcggtggsaagg 988
||||||||||||||||||||||| ||||
Sbjct: 2202 gaaggcattggaaagatcggtggcaagg 2229
>3x_Contig1560
Length = 9209
Score = 483 bits (241), Expect = e-136
Identities = 250/255 (98%)
Strand = Plus / Plus
Query: 734 acttcatcactatcaccatatctgtractatattgtctaatttcacccaacctcttaagc 793
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8316 acttcatcactatcaccatatctgtaactatattgtctaatttcacccaacctcttaagc 8375
Query: 794 ttttcctggaacgcaatgttggcgtttatcacggaatcggtctgctttgccgaggataag 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8376 ttttcctggaacgcaatgttggcgtttatcacggaatcggtctgctttgccgaggataag 8435
Query: 854 catcgcaagaagtcttctgctatggtctgcatctcctgtgggcagcggasaggtagtgag 913
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8436 catcgcaagaagtcttctgctatggtctgcatctcctgtgggcagcggagcagtagtgag 8495
Query: 914 acaaactcgggcagaatattgactatggtattgatatcaccatcgatgaaggcattggaa 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8496 acaaactcgggcagaatattgactatggtattgatatcaccatcgatgaaggcattggaa 8555
Query: 974 agatcggtggsaagg 988
|||||||||| ||||
Sbjct: 8556 agatcggtggcaagg 8570
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6900
Number of Sequences: 1807
Number of extensions: 6900
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 2
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)